Unspliced Genome

  • Try to combine the info here with the Spliced Genome. Interesting perspectives might be found, such as the length of the sequences, and the number of codons.
  • Also try to combine the information here with the "Protein Info" page might provide some interesting insights. For example, the length of the genome or amino acid sequence or the place where the sequence difference occurs between wild-type and mutants.
  • By combining the information here with the "Protein Info" page, you can also compare the DNA codon to the amino acid sequence, some interesting relationship might be found.
  • Remember the characteristics you did while first saw the wild type and mutants? Try to think how the info provided in pages like "Protein Info", "Spliced Genome" and "Unspliced Genome" can be used to explain those characteristics differences.
  • Tools for sequences comparison are provided down in the bottom of this page. For each program, you can simply copy and paste the sequence of your interest to any of the programs and see how sequences differ from each other. See whether you can gain some insight on the difference.
  • You might find DOTLET's alignment tool helpful while comparing spliced and unspliced DNA sequences.

 

Genotype and Relative Info
Movie Subject
Genotype
Length of the DNA Sequence (base pair)
Number of Codons of This Gene
WT
wild-type
4454 bps
707
mutant 1
zyg-1(oj7)
4454 bps
707
mutant 2
zyg-1(b1)
4454 bps
707
mutant 3
zyg-1(it4)
4133 bps
616
mutant 4
zyg-1(it37)
4388 bps
685

 

Nucleotide Sequence
Movie Subject
Nucleotide (DNA) sequence of alleles of the zyg-1 Gene
WT
atgagcggtg ggaagagtgg ttcaagattg agtgtaggta tttctactat ttttgccgat accatgtaag aatctatatt ttcttcaggc ctattcacat ttaaaagaaa tcgggaaagg tggattcggc gttgtatatg cagcacaaag agaaaatgga gagaaggtgg cgattaagag ggtaagtttc atgctgtttt ctaaagatat tcgaatggga caatttttct actttttttc tttacaaaaa ttgtattttc agatcgataa aaaggtgcca aaaaatcgtg tttggacgga aattcaaacg atgaaggaat tgaagaaaag caaatatgtg gtcgagtttt acgaagattt cgttgaagat ggttatacat acatagtcat ggagttgtgc gaaggaggat ctcttcaagc ttatgtgcgg gagcacggag ctctggacga cgcaacagca gttcatgttt tacgacagct gatttctgct gtatctttta tgcacagggt gaatgttatt caccgagacc tctcggctgg taatgtgttc atcaaagact cgaaaaagaa gaaaatgacg gttaaacttg gcgattttgg cctcgcgacc actcttgggc gtggtgagac cacatgtaca attgtcggaa caccaggatt cattgctcca caagtatacg atcaagaata tacccagtct gccgatgtat attctcttgg tgcagttctc tatactatgc tcactgctcg taatccccca cctaaaggac taccaccaac ctgcggaatg tcaccaaatg ctgctagatt agtggaacaa atgatggata cagatgcaaa gaagcgtatt ccgttaacgc agatagtttt atcagagttc atgtacgaga atacgaatga aaatgcggta atcttctcga gagaacactc gcgggatgga cgacgacaga gatcgaggga accagtaaga tcctcaagag atgatcgatc tcgagatggc agagctctga taaggtcttc gagtcaacct gcacattctg gcagagcacc gctgagcaat cgaccaattc atgacagggt aagtgttcca gcagatcaca aaaattttat tttatttttg acaattaaat gcattaaaaa tatattacaa tttattttta gatgccttct acatcttcaa gaggatttga ttctgagaga ggaagagaac gggatagaga cagtggccgc ggtaccgtac ctccaagccg tgaagatcga aaccgttcac agttgtggcc gatccgaatg gataggttag aaggacaaag agtttgtact gctggaggac gatatattgt tgaattggat actcgttgtc ggtttgaagt tgcagctcaa gggaatttcg ttaaacgaat tttgattgtc gaagttgatg aaatggttca aacggtttat gtacatcgaa tacctgatag aacagtacgc ggaagaaatg gagaagaaga attgattacg ttgacgaaca atccttttgt ttatacttcg taagttaatt attctattaa aaaacggaaa cgtttgtaga aactagtaac accatatttt gtcttctttt ctaaattttt agctgaaatt attttaaaaa cgttcattcc gccaataatt ataacaatga acaatttaat atcctggagc agttctcggt gttggacagt gttcacatcc tcctccggtt cctggttctc ccggtggtcc tggctgtccg ggtcttcctg gttgaccatc tttcccgtct cttccaggct cacctgctgg tccttgttca ccgtcttgtc ctggatttcc tggagttcca ggcagcccgt caggtcctgg taatcctgga ggtcccggac ttcctggagg cccttgagca acgttcactt catcacattt tcctggctct ccgttatctc ccggctgacc tgggtctcca tcctctccag gctctccatc atctcctggt tctcctggct gacctggtag tcctggaact cctggaagac catctttccc gtttcttcct ggttgtccct ttgatccaat atttcctggt ggtcctggtg gccctacagg gcaatcgtaa catggtgcag ctgcatcacg tcgtggagct gaatcctttg catctgtacc gtcttctcca ttaagtcctg gttttccatc tctaccatcc cgtccatctt ctcctggtgg tcctggtggt ccagatggtc cggttttgca agaacagcat tgtcctcctg gagccaaaga ggatttgctg ctactgaatc cggactcggc atttgtattc gattcagcga aatcgtagcc agcttgtttc tttacaataa ttcttcttcc tttgattcct gatgcggatt gcattctttc gtattgaatg aacaatccaa ctgttctatg acgacagaaa tcaatttcgc tgtgcaaatt ggtttgaaca tgttgcatgt agttgtagag tagaggaata gcgataatac aagttaaagt tgatactgtg ctgaaattat attaatttta aaaatataac aaaaatataa caattacctg atgcaaatcc cgagaaatgc aacctttcga agcatagaag cttcatgatt cagttccttc tcgtccataa ttcctaatta aaaggagaag atgtcttcta ctttctgacg gaaccccttt tatacatatt attcgcttat ctccgatatt tttttctttt tctgaaataa gccttcagtt ctccaaaata gggcactttt tcatccgcaa tagcttctcg tcaccttaat agccactgct gttgtttttt tttcggtccg ccgaaatctt atcattcaag atcttatcta tcgttccgtt aagcttgttt cactttctcc cgtatctcgt gtttttttga gaattaaaaa tcggaaaggt accgagcaag ggtgtcggtt tttcgatttt tcagaaaatc gagaaactaa aattttttga tttttgaaaa aaaaaaccta caaaaaatga taatgttttc ttttgaacct ttttctccat cattcatttt cagaatataa atgcgaatag aaagttgtag gggttttgaa tatctattca aaaagggttc ccacagggaa ggataatcat aaaagtacag cagtacgtgt atcgtacgtg ttgatacctt cttaattgag ctaataattg aatatgtatg taggtcattg ggttgtaaaa tgtgtctctt tatggggagg atggcgatgt gttggcagct aaatgtatct ctcttcaaaa aaattgagat tatgagagta aaggagaata tgataccttg taggagattg atgaataaat tggataatgt gctgaacaat tatatttcat ttgtcacaag atttttcttc gaataaacaa caattacatc taaacagaaa aataaactat ttatttcatt tttagatttt cactgaaaaa acatcgaaaa atggaaaatt gacctttaaa tacataataa ttcaaaaatc accaataaca acttttttca gatattccca aatgccaaaa gaagtccaaa acgattatat gcgtctccaa aagatggttg ctgtgacgat aagtggtcga gtagcaaaag taacatttcg acgtccatca caattcccag atgctcaagc tcaacttatg gagaatggag atctccgtat caaacttccg agatcagtaa ttgttcgtaa aatggataat ggtgaaattt tcaattgcat cgatggaatc gcgacccaaa aacaggcagt ttctggaata acacttacaa aagtgaatga agtatataaa tatctaataa gattcgagca atgtcttaac ggaatggatc gaggaatggt gtgctttccc attgttttca gtgcaggaac taatatgtaa gtttgaattt tttggcaaag accctctaac tttattttag ggttggcagt tcgccgtctt cattaatgcc atcaggatct tctcaaactt cccgatttcc atttagtaat ttatcgaaca atcagccatc attagttccc cattcggctc cttttcttac gaaaccaact tcatctcaac gagcatcatc ggctaatgtt cagagaaggg tatcaactga tgaaaattcg tcacctagtg tggctccatc aaagtataaa ataaaaattg taagttttca atctgagagc cgtaaagcat aaatgtatta tttgaaggac cctacaactc aaaaagttcg atcaattcaa gcaacagacg gtcgtgtgct acgatgttcc acaagtaaag cggatcaatt cattttcaca gatccggcga ttcgtcctga tgatcaacga tttatgcgaa ctgatcgagt acctgacaga gcttcagaaa tgcttcatac gctgtgcgaa cgtatgagaa aactacatca ataa
Mutant 1
atgagcggtg ggaagagtgg ttcaagattg agtgtaggta tttctactat ttttgccgat accatgtaag aatctatatt ttcttcaggc ctattcacat ttaaaagaaa tcgggaaagg tggattcggc gttgtatatg cagcacaaag agaaaatgga gagaaggtgg cgattaagag ggtaagtttc atgctgtttt ctaaagatat tcgaatggga caatttttct actttttttc tttacaaaaa ttgtattttc agatcgataa aaaggtgcca aaaaatcgtg tttggacgga aattcaaacg atgaaggaat tgaagaaaag caaatatgtg gtcgagtttt acgaagattt cgttgaagat ggttatacat acatagtcat ggagttgtgc gaaggaggat ctcttcaagc ttatgtgcgg gagcacggag ctctggacga cgcaacagca gttcatgttt tacgacagct gatttctgct gtatctttta tgcacagggt gaatgttatt caccgagacc tctcggctgg taatgtgttc atcaaagact cgaaaaagaa gaaaatgacg gttaaacttg gcgattttgg cctcgcgacc actcttgggc gtggtgagac cacatgtaca attgtcggaa caccaggatt cattgctcca caagtatacg atcaagaata tacccagtct gccgatgtat attctcttgg tgcagttctc tatactatgc tcactgctcg taatccccca cctaaaggac taccaccaac ctgcggaatg tcaccaaatg ctgctagatt agtggaacaa atgatggata cagatgcaaa gaagcgtatt ccgttaacgc agatagtttt atcagagttc atgtacgaga atacgaatga aaatgcggta atcttctcga gagaacactc gcgggatgga cgacgacaga gatcgaggga accagtaaga tcctcaagag atgatcgatc tcgagatggc agagctctga taaggtcttc gagtcaacct gcacattctg gcagagcacc gctgagcaat cgaccaattc atgacagggt aagtgttcca gcagatcaca aaaattttat tttatttttg acaattaaat gcattaaaaa tatattacaa tttattttta gatgccttct acatcttcaa gaggatttga ttctgagaga ggaagagaac gggatagaga cagtggccgc ggtaccgtac ctccaagccg tgaagatcga aaccgttcac agttgtggcc gatccgaatg gataggttag aaggacaaag agtttgtact gctggaggac aaagttgatg aaatggttca aacggtttat gtacatcgaa tacctgatag aacagtacgc ggaagaaatg gagaagaaga attgattacg ttgacgaaca atccttttgt ttatacttcg taagttaatt attctattaa aaaacggaaa cgtttgtaga aactagtaac accatatttt gtcttctttt ctaaattttt agctgaaatt attttaaaaa cgttcattcc gccaataatt ataacaatga acaatttaat atcctggagc agttctcggt gttggacagt gttcacatcc tcctccggtt cctggttctc ccggtggtcc tggctgtccg ggtcttcctg gttgaccatc tttcccgtct cttccaggct cacctgctgg tccttgttca ccgtcttgtc ctggatttcc tggagttcca ggcagcccgt caggtcctgg taatcctgga ggtcccggac ttcctggagg cccttgagca acgttcactt catcacattt tcctggctct ccgttatctc ccggctgacc tgggtctcca tcctctccag gctctccatc atctcctggt tctcctggct gacctggtag tcctggaact cctggaagac catctttccc gtttcttcct ggttgtccct ttgatccaat atttcctggt ggtcctggtg gccctacagg gcaatcgtaa catggtgcag ctgcatcacg tcgtggagct gaatcctttg catctgtacc gtcttctcca ttaagtcctg gttttccatc tctaccatcc cgtccatctt ctcctggtgg tcctggtggt ccagatggtc cggttttgca agaacagcat tgtcctcctg gagccaaaga ggatttgctg ctactgaatc cggactcggc atttgtattc gattcagcga aatcgtagcc agcttgtttc tttacaataa ttcttcttcc tttgattcct gatgcggatt gcattctttc gtattgaatg aacaatccaa ctgttctatg acgacagaaa tcaatttcgc tgtgcaaatt ggtttgaaca tgttgcatgt agttgtagag tagaggaata gcgataatac aagttaaagt tgatactgtg ctgaaattat attaatttta aaaatataac aaaaatataa caattacctg atgcaaatcc cgagaaatgc aacctttcga agcatagaag cttcatgatt cagttccttc tcgtccataa ttcctaatta aaaggagaag atgtcttcta ctttctgacg gaaccccttt tatacatatt attcgcttat ctccgatatt tttttctttt tctgaaataa gccttcagtt ctccaaaata gggcactttt tcatccgcaa tagcttctcg tcaccttaat agccactgct gttgtttttt tttcggtccg ccgaaatctt atcattcaag atcttatcta tcgttccgtt aagcttgttt cactttctcc cgtatctcgt gtttttttga gaattaaaaa tcggaaaggt accgagcaag ggtgtcggtt tttcgatttt tcagaaaatc gagaaactaa aattttttga tttttgaaaa aaaaaaccta caaaaaatga taatgttttc ttttgaacct ttttctccat cattcatttt cagaatataa atgcgaatag aaagttgtag gggttttgaa tatctattca aaaagggttc ccacagggaa ggataatcat aaaagtacag cagtacgtgt atcgtacgtg ttgatacctt cttaattgag ctaataattg aatatgtatg taggtcattg ggttgtaaaa tgtgtctctt tatggggagg atggcgatgt gttggcagct aaatgtatct ctcttcaaaa aaattgagat tatgagagta aaggagaata tgataccttg taggagattg atgaataaat tggataatgt gctgaacaat tatatttcat ttgtcacaag atttttcttc gaataaacaa caattacatc taaacagaaa aataaactat ttatttcatt tttagatttt cactgaaaaa acatcgaaaa atggaaaatt gacctttaaa tacataataa ttcaaaaatc accaataaca acttttttca gatattccca aatgccaaaa gaagtccaaa acgattatat gcgtctccaa aagatggttg ctgtgacgat aagtggtcga gtagcaaaag taacatttcg acgtccatca caattcccag atgctcaagc tcaacttatg gagaatggag atctccgtat caaacttccg agatcagtaa ttgttcgtaa aatggataat ggtgaaattt tcaattgcat cgatggaatc gcgacccaaa aacaggcagt ttctggaata acacttacaa aagtgaatga agtatataaa tatctaataa gattcgagca atgtcttaac ggaatggatc gaggaatggt gtgctttccc attgttttca gtgcaggaac taatatgtaa gtttgaattt tttggcaaag accctctaac tttattttag ggttggcagt tcgccgtctt cattaatgcc atcaggatct tctcaaactt cccgatttcc atttagtaat ttatcgaaca atcagccatc attagttccc cattcggctc cttttcttac gaaaccaact tcatctcaac gagcatcatc ggctaatgtt cagagaaggg tatcaactga tgaaaattcg tcacctagtg tggctccatc aaagtataaa ataaaaattg taagttttca atctgagagc cgtaaagcat aaatgtatta tttgaaggac cctacaactc aaaaagttcg atcaattcaa gcaacagacg gtcgtgtgct acgatgttcc acaagtaaag cggatcaatt cattttcaca gatccggcga ttcgtcctga tgatcaacga tttatgcgaa ctgatcgagt acctgacaga gcttcagaaa tgcttcatac gctgtgcgaa cgtatgagaa aactacatca ataa
Mutant 2

atgagcggtg ggaagagtgg ttcaagattg agtgcctatt cacatttaaa agaaatcggg aaaggtggat tcggcgttgt atatgcagca caaagagaaa atggagagaa ggtggcgatt aagaggatcg ataaaaaggt gccaaaaaat cgtgtttgga cggaaattca aacgatgaag gaattgaaga aaagcaaata tgtggtcgag ttttacgaag atttcgttga agatggttat acatacatag tcatggagtt gtgcgaagga ggatctcttc aagcttatgt gcgggagcac ggagctctgg acgacgcaac agcagttcat gttttacgac agctgatttc tgctgtatct tttatgcaca gggtgaatgt tattcaccga gacctctcgg ctggtaatgt gttcatcaaa gactcgaaaa agaagaaaat gacggttaaa cttggcgatt ttggcctcgc gaccactctt gggcgtggtg agaccacatg tacaattgtc ggaacaccag gattcattgc tccacaagta tacgatcaag aatataccca gtctgccgat gtatattctc ttggtgcagt tctctatact atgctcactg ctcgtaatcc cccacctaaa ggactaccac caacctgcgg aatgtcacca aatgctgcta gattagtgga acaaatgatg gatacagatg caaagaagcg tattccgtta acgcagatag ttttatcaga gttcatgtac gagaatacga atgaaaatgc ggtaatcttc tcgagagaac actcgcggga tggacgacga cagagatcga gggaaccagt aagatcctca agagatgatc gatctcgaga tggcagagct ctgataaggt cttcgagtca acctgcacat tctggcagag caccgctgag caatcgacca attcatgaca ggatgccttc tacatcttca agaggatttg attctgagag aggaagagaa cgggatagag acagtggccg cggtaccgta cctccaagcc gtgaagatcg aaaccgttca cagttgtggc cgatccgaat ggataggtta gaaggacaaa gagtttgtac tgctggagga cgatatattg ttgaattgga tactcgttgt cggtttgaag ttgcagctca agggaatttc gttaaacgaa ttttgattgt cgaagttgat gaaatggttc aaacggttta tgtacatcga atacctgata gaacagtacg cggaagaaat ggagaagaag aattgattac gttgacgaac aatctttttg tttatacttc atattcccaa atgccaaaag aagtccaaaa cgattatatg cgtctccaaa agatggttgc tgtgacgata agtggtcgag tagcaaaagt aacatttcga cgtccatcac aattcccaga tgctcaagct caacttatgg agaatggaga tctccgtatc aaacttccga gatcagtaat tgttcgtaaa atggataatg gtgaaatttt caattgcatc gatggaatcg cgacccaaaa acaggcagtt tctggaataa cacttacaaa agtgaatgaa gtatataaat atctaataag attcgagcaa tgtcttaacg gaatggatcg aggaatggtg tgctttccca ttgttttcag tgcaggaact aatatggttg gcagttcgcc gtcttcatta atgccatcag gatcttctca aacttcccga tttccattta gtaatttatc gaacaatcag ccatcattag ttccccattc ggctcctttt cttacgaaac caacttcatc tcaacgagca tcatcggcta atgttcagag aagggtatca actgatgaaa attcgtcacc tagtgtggct ccatcaaagt ataaaataaa aattgaccct acaactcaaa aagttcgatc aattcaagca acagacggtc gtgtgctacg atgttccaca agtaaagcgg atcaattcat tttcacagat ccggcgattc gtcctgatga tcaacgattt atgcgaactg atcgagtacc tgacagagct tcagaaatgc ttcatacgct gtgcgaacgt atgagaaaac tacatcaata actttttgt ttatacttcg taagttaatt attctattaa aaaacggaaa cgtttgtaga aactagtaac accatatttt gtcttctttt ctaaattttt agctgaaatt attttaaaaa cgttcattcc gccaataatt ataacaatga acaatttaat atcctggagc agttctcggt gttggacagt gttcacatcc tcctccggtt cctggttctc ccggtggtcc tggctgtccg ggtcttcctg gttgaccatc tttcccgtct cttccaggct cacctgctgg tccttgttca ccgtcttgtc ctggatttcc tggagttcca ggcagcccgt caggtcctgg taatcctgga ggtcccggac ttcctggagg cccttgagca acgttcactt catcacattt tcctggctct ccgttatctc ccggctgacc tgggtctcca tcctctccag gctctccatc atctcctggt tctcctggct gacctggtag tcctggaact cctggaagac catctttccc gtttcttcct ggttgtccct ttgatccaat atttcctggt ggtcctggtg gccctacagg gcaatcgtaa catggtgcag ctgcatcacg tcgtggagct gaatcctttg catctgtacc gtcttctcca ttaagtcctg gttttccatc tctaccatcc cgtccatctt ctcctggtgg tcctggtggt ccagatggtc cggttttgca agaacagcat tgtcctcctg gagccaaaga ggatttgctg ctactgaatc cggactcggc atttgtattc gattcagcga aatcgtagcc agcttgtttc tttacaataa ttcttcttcc tttgattcct gatgcggatt gcattctttc gtattgaatg aacaatccaa ctgttctatg acgacagaaa tcaatttcgc tgtgcaaatt ggtttgaaca tgttgcatgt agttgtagag tagaggaata gcgataatac aagttaaagt tgatactgtg ctgaaattat attaatttta aaaatataac aaaaatataa caattacctg atgcaaatcc cgagaaatgc aacctttcga agcatagaag cttcatgatt cagttccttc tcgtccataa ttcctaatta aaaggagaag atgtcttcta ctttctgacg gaaccccttt tatacatatt attcgcttat ctccgatatt tttttctttt tctgaaataa gccttcagtt ctccaaaata gggcactttt tcatccgcaa tagcttctcg tcaccttaat agccactgct gttgtttttt tttcggtccg ccgaaatctt atcattcaag atcttatcta tcgttccgtt aagcttgttt cactttctcc cgtatctcgt gtttttttga gaattaaaaa tcggaaaggt accgagcaag ggtgtcggtt tttcgatttt tcagaaaatc gagaaactaa aattttttga tttttgaaaa aaaaaaccta caaaaaatga taatgttttc ttttgaacct ttttctccat cattcatttt cagaatataa atgcgaatag aaagttgtag gggttttgaa tatctattca aaaagggttc ccacagggaa ggataatcat aaaagtacag cagtacgtgt atcgtacgtg ttgatacctt cttaattgag ctaataattg aatatgtatg taggtcattg ggttgtaaaa tgtgtctctt tatggggagg atggcgatgt gttggcagct aaatgtatct ctcttcaaaa aaattgagat tatgagagta aaggagaata tgataccttg taggagattg atgaataaat tggataatgt gctgaacaat tatatttcat ttgtcacaag atttttcttc gaataaacaa caattacatc taaacagaaa aataaactat ttatttcatt tttagatttt cactgaaaaa acatcgaaaa atggaaaatt gacctttaaa tacataataa ttcaaaaatc accaataaca acttttttca gatattccca aatgccaaaa gaagtccaaa acgattatat gcgtctccaa aagatggttg ctgtgacgat aagtggtcga gtagcaaaag taacatttcg acgtccatca caattcccag atgctcaagc tcaacttatg gagaatggag atctccgtat caaacttccg agatcagtaa ttgttcgtaa aatggataat ggtgaaattt tcaattgcat cgatggaatc gcgacccaaa aacaggcagt ttctggaata acacttacaa aagtgaatga agtatataaa tatctaataa gattcgagca atgtcttaac ggaatggatc gaggaatggt gtgctttccc attgttttca gtgcaggaac taatatgtaa gtttgaattt tttggcaaag accctctaac tttattttag ggttggcagt tcgccgtctt cattaatgcc atcaggatct tctcaaactt cccgatttcc atttagtaat ttatcgaaca atcagccatc attagttccc cattcggctc cttttcttac gaaaccaact tcatctcaac gagcatcatc ggctaatgtt cagagaaggg tatcaactga tgaaaattcg tcacctagtg tggctccatc aaagtataaa ataaaaattg taagttttca atctgagagc cgtaaagcat aaatgtatta tttgaaggac cctacaactc aaaaagttcg atcaattcaa gcaacagacg gtcgtgtgct acgatgttcc acaagtaaag cggatcaatt cattttcaca gatccggcga ttcgtcctga tgatcaacga tttatgcgaa ctgatcgagt acctgacaga gcttcagaaa tgcttcatac gctgtgcgaa cgtatgagaa aactacatca ataa

Mutant 3
atgagcggtg ggaagagtgg ttcaagattg agtgtaggta tttctactat ttttgccgat accatgtaag aatctatatt ttcttcaggc ctattcacat ttaaaagaaa tcgggaaagg tggattcggc gttgtatatg cagcacaaag agaaaatgga gagaaggtgg cgattaagag ggtaagtttc atgctgtttt ctaaagatat tcgaatggga caatttttct actttttttc tttacaaaaa ttgtattttc agatcgataa aaaggtgcca aaaaatcgtg tttggacgga aattcaaacg atgaaggaat tgaagaaaag caaatatgtg gtcgagtttt acgaagattt cgttgaagat ggttatacat acatagtcat ggagttgtgc gaaggaggat ctcttcaagc ttatgtgcgg gagcacggag ctctggacga cgcaacagca gttcatgttt tacgacagct gatttctgct gtatctttta tgcacagggt gaatgttatt caccgagacc tctcggctgg taatgtgttc atcaaagact cgaaaaagaa gaaaatgacg gttaaacttg gcgattttgg cctcgcgacc actcttgggc gtggtgagac cacatgtaca attgtcggaa caccaggatt cattgctcca caagtatacg atcaagaata tacccagtct gccgatgtat attctcttgg tgcagttctc tatactatgc tcactgctcg taatccccca cctaaaggac taccaccaac ctgcggaatg tcaccaaatg ctgctagatt agtggaacaa atgatggata cagatgcaaa gaagcgtatt ccgttaacgc agatagtttt atcagagttc atgtacgaga atacgaatga aaatgcggta atcttctcga gagaacactc gcgggatgga cgacgacaga gatcgaggga accagtaaga tcctcaagag atgatcgatc tcgagatggc agagctctga taaggtcttc gagtcaacct gcacattctg gcagagcacc gctgagcaat cgaccaattc atgacagggt aagtgttcca gcagatcaca aaaattttat tttatttttg acaattaaat gcattaaaaa tatattacaa tttattttta gatgccttct acatcttcaa gaggatttga ttctgagaga ggaagagaac gggatagaga cagtggccgc ggtaccgtac ctccaagccg tgaagatcga aaccgttcac agttgtggcc gatccgaatg gataggttag aaggacaaag agtttgtact gctggaggac gatatattgt tgaattggat actcgttgtc ggtttgaagt tgcagctcaa gggaatttcg ttaaacgaat tttgattgtc gaagttgatg aaatggttca aacggtttat gtacatcgaa tacctgatag aacagtacgc ggaagaaatg gagaagaaga attgattacg ttgacgaaca atccttttgt ttatacttcg taagttaatt attctattaa aaaacggaaa cgtttgtaga aactagtaac accatatttt gtcttctttt ctaaattttt agctgaaatt attttaaaaa cgttcattcc gccaataatt ataacaatga acaatttaat atcctggagc agttctcggt gttggacagt gttcacatcc tcctccggtt cctggttctc ccggtggtcc tggctgtccg ggtcttcctg gttgaccatc tttcccgtct cttccaggct cacctgctgg tccttgttca ccgtcttgtc ctggatttcc tggagttcca ggcagcccgt caggtcctgg taatcctgga ggtcccggac ttcctggagg cccttgagca acgttcactt catcacattt tcctggctct ccgttatctc ccggctgacc tgggtctcca tcctctccag gctctccatc atctcctggt tctcctggct gacctggtag tcctggaact cctggaagac catctttccc gtttcttcct ggttgtccct ttgatccaat atttcctggt ggtcctggtg gccctacagg gcaatcgtaa catggtgcag ctgcatcacg tcgtggagct gaatcctttg catctgtacc gtcttctcca ttaagtcctg gttttccatc tctaccatcc cgtccatctt ctcctggtgg tcctggtggt ccagatggtc cggttttgca agaacagcat tgtcctcctg gagccaaaga ggatttgctg ctactgaatc cggactcggc atttgtattc gattcagcga aatcgtagcc agcttgtttc tttacaataa ttcttcttcc tttgattcct gatgcggatt gcattctttc gtattgaatg aacaatccaa ctgttctatg acgacagaaa tcaatttcgc tgtgcaaatt ggtttgaaca tgttgcatgt agttgtagag tagaggaata gcgataatac aagttaaagt tgatactgtg ctgaaattat attaatttta aaaatataac aaaaatataa caattacctg atgcaaatcc cgagaaatgc aacctttcga agcatagaag cttcatgatt cagttccttc tcgtccataa ttcctaatta aaaggagaag atgtcttcta ctttctgacg gaaccccttt tatacatatt attcgcttat ctccgatatt tttttctttt tctgaaataa gccttcagtt ctccaaaata gggcactttt tcatccgcaa tagcttctcg tcaccttaat agccactgct gttgtttttt tttcggtccg ccgaaatctt atcattcaag atcttatcta tcgttccgtt aagcttgttt cactttctcc cgtatctcgt gtttttttga gaattaaaaa tcggaaaggt accgagcaag ggtgtcggtt tttcgatttt tcagaaaatc gagaaactaa aattttttga tttttgaaaa aaaaaaccta caaaaaatga taatgttttc ttttgaacct ttttctccat cattcatttt cagaatataa atgcgaatag aaagttgtag gggttttgaa tatctattca aaaagggttc ccacagggaa ggataatcat aaaagtacag cagtacgtgt atcgtacgtg ttgatacctt cttaattgag ctaataattg aatatgtatg taggtcattg ggttgtaaaa tgtgtctctt tatggggagg atggcgatgt gttggcagct aaatgtatct ctcttcaaaa aaattgagat tatgagagta aaggagaata tgataccttg taggagattg atgaataaat tggataatgt gctgaacaat tatatttcat ttgtcacaag atttttcttc gaataaacaa caattacatc taaacagaaa aataaactat ttatttcatt tttagatttt cactgaaaaa acatcgaaaa atggaaaatt gacctttaaa tacataataa ttcaaaaatc accaataaca acttttttca gatattccca aatgccaaaa gaagtccaaa acgattatat gcgtctccaa aagatggttg ctgtgacgat aagtggtcga gtagcaaaag taacatttcg acgtccatca caattcccag atgctcaagc tcaacttatg gagaatggag atctccgtat caaacttccg agatcagtaa ttgttcgtaa aatggataat ggtgaaattt tcaattgcat cgatggaatc gcgacccaaa aacaggcagt ttctggaata acacttacaa aagtgaatga agtatataaa tatctaataa gattcgagca atgtcttaac ggaatggatc gaggaatggt gtgctttccc attgttttca gtgcaggaac taatatgtaa gtttgaattt tttggcaaag accctctaac tttattttag ggttggcagt tcgccgtctt cattaatgcc atcaggatct tctcaaactt cccgatttcc atttagtaat ttatcgaaca atcagccatc attagttccc cattcggctc cttttcttac gaaaccaact tcatctcaac gagcatcatc ggctaatgtt tag
Mutant 4
atgagcggtg ggaagagtgg ttcaagattg agtgtaggta tttctactat ttttgccgat accatgtaag aatctatatt ttcttcaggc ctattcacat ttaaaagaaa tcgggaaagg tggattcggc gttgtatatg cagcacaaag agaaaatgga gagaaggtgg cgattaagag ggtaagtttc atgctgtttt ctaaagatat tcgaatggga caatttttct actttttttc tttacaaaaa ttgtattttc agatcgataa aaaggtgcca aaaaatcgtg tttggacgga aattcaaacg atgaaggaat tgaagaaaag caaatatgtg gtcgagtttt acgaagattt cgttgaagat ggttatacat acatagtcat ggagttgtgc gaaggaggat ctcttcaagc ttatgtgcgg gagcacggag ctctggacga cgcaacagca gttcatgttt tacgacagct gatttctgct gtatctttta tgcacagggt gaatgttatt caccgagacc tctcggctgg taatgtgttc atcaaagact cgaaaaagaa gaaaatgacg gttaaacttg gcgattttgg cctcgcgacc actcttgggc gtggtgagac cacatgtaca attgtcggaa caccaggatt cattgctcca caagtatacg atcaagaata tacccagtct gccgatgtat attctcttgg tgcagttctc tatactatgc tcactgctcg taatccccca cctaaaggac taccaccaac ctgcggaatg tcaccaaatg ctgctagatt agtggaacaa atgatggata cagatgcaaa gaagcgtatt ccgttaacgc agatagtttt atcagagttc atgtacgaga atacgaatga aaatgcggta atcttctcga gagaacactc gcgggatgga cgacgacaga gatcgaggga accagtaaga tcctcaagag atgatcgatc tcgagatggc agagctctga taaggtcttc gagtcaacct gcacattctg gcagagcacc gctgagcaat cgaccaattc atgacagggt aagtgttcca gcagatcaca aaaattttat tttatttttg acaattaaat gcattaaaaa tatattacaa tttattttta gatgccttct acatcttcaa gaggatttga ttctgagaga ggaagagaac gggatagaga cagtggccgc ggtaccgtac ctccaagccg tgaagatcga aaccgttcac agttgtggcc gatccgaatg gataggttag aaggacaaag agtttgtact gctggaggac gatatattgt tgaattggat actcgttgtc ggtttgaagt tgcagctcaa gggaatttcg ttaaacgaat tttgattgtc gaagttgatg aaatggttca aacggtttat gtacatcgaa tacctgatag aacagtacgc ggaagaaatg gagaagaaga attgattacg ttgacgaaca atccttttgt ttatacttcg taagttaatt attctattaa aaaacggaaa cgtttgtaga aactagtaac accatatttt gtcttctttt ctaaattttt agctgaaatt attttaaaaa cgttcattcc gccaataatt ataacaatga acaatttaat atcctggagc agttctcggt gttggacagt gttcacatcc tcctccggtt cctggttctc ccggtggtcc tggctgtccg ggtcttcctg gttgaccatc tttcccgtct cttccaggct cacctgctgg tccttgttca ccgtcttgtc ctggatttcc tggagttcca ggcagcccgt caggtcctgg taatcctgga ggtcccggac ttcctggagg cccttgagca acgttcactt catcacattt tcctggctct ccgttatctc ccggctgacc tgggtctcca tcctctccag gctctccatc atctcctggt tctcctggct gacctggtag tcctggaact cctggaagac catctttccc gtttcttcct ggttgtccct ttgatccaat atttcctggt ggtcctggtg gccctacagg gcaatcgtaa catggtgcag ctgcatcacg tcgtggagct gaatcctttg catctgtacc gtcttctcca ttaagtcctg gttttccatc tctaccatcc cgtccatctt ctcctggtgg tcctggtggt ccagatggtc cggttttgca agaacagcat tgtcctcctg gagccaaaga ggatttgctg ctactgaatc cggactcggc atttgtattc gattcagcga aatcgtagcc agcttgtttc tttacaataa ttcttcttcc tttgattcct gatgcggatt gcattctttc gtattgaatg aacaatccaa ctgttctatg acgacagaaa tcaatttcgc tgtgcaaatt ggtttgaaca tgttgcatgt agttgtagag tagaggaata gcgataatac aagttaaagt tgatactgtg ctgaaattat attaatttta aaaatataac aaaaatataa caattacctg atgcaaatcc cgagaaatgc aacctttcga agcatagaag cttcatgatt cagttccttc tcgtccataa ttcctaatta aaaggagaag atgtcttcta ctttctgacg gaaccccttt tatacatatt attcgcttat ctccgatatt tttttctttt tctgaaataa gccttcagtt ctccaaaata gggcactttt tcatccgcaa tagcttctcg tcaccttaat agccactgct gttgtttttt tttcggtccg ccgaaatctt atcattcaag atcttatcta tcgttccgtt aagcttgttt cactttctcc cgtatctcgt gtttttttga gaattaaaaa tcggaaaggt accgagcaag ggtgtcggtt tttcgatttt tcagaaaatc gagaaactaa aattttttga tttttgaaaa aaaaaaccta caaaaaatga taatgttttc ttttgaacct ttttctccat cattcatttt cagaatataa atgcgaatag aaagttgtag gggttttgaa tatctattca aaaagggttc ccacagggaa ggataatcat aaaagtacag cagtacgtgt atcgtacgtg ttgatacctt cttaattgag ctaataattg aatatgtatg taggtcattg ggttgtaaaa tgtgtctctt tatggggagg atggcgatgt gttggcagct aaatgtatct ctcttcaaaa aaattgagat tatgagagta aaggagaata tgataccttg taggagattg atgaataaat tggataatgt gctgaacaat tatatttcat ttgtcacaag atttttcttc gaataaacaa caattacatc taaacagaaa aataaactat ttatttcatt tttagatttt cactgaaaaa acatcgaaaa atggaaaatt gacctttaaa tacataataa ttcaaaaatc accaataaca acttttttca gatattccca aatgccaaaa gaagtccaaa acgattatat gcgtctccaa aagatggttg ctgtgacgat aagtggtcga gtagcaaaag taacatttcg acgtccatca caattcccag atgctcaagc tcaacttatg gagaatggag atctccgtat caaacttccg agatcagtaa ttgttcgtaa aatggataat ggtgaaattt tcaattgcat cgatggaatc gcgacccaaa aacaggcagt ttctggaata acacttacaa aagtgaatga agtatataaa tatctaataa gattcgagca atgtcttaac ggaatggatc gaggaatggt gtgctttccc attgttttca gtgcaggaac taatatgtaa gtttgaattt tttggcaaag accctctaac tttattttag ggttggcagt tcgccgtctt cattaatgcc atcaggatct tctcaaactt cccgatttcc atttagtaat ttatcgaaca atcagccatc attagttccc cattcggctc cttttcttac gaaaccaact tcatctcaac gagcatcatc ggctaatgtt cagagaaggg tatcaactga tgaaaattcg tcacctagtg tggctccatc aaagtataaa ataaaaattg taagttttca atctgagagc cgtaaagcat aaatgtatta tttgaaggac cctacaactc aaaaagttcg atcaattcaa gcaacagacg gtcgtgtgct acgatgttcc acaagtaaag cggatcaatt cattttcaca gatccggcga ttcgtcctga tgatcaacga tttatgcgaa ctgattga

* Wondering where the wild type sequence is from? Try WormBase. Brief instructions on how to search can be found here.

Tools
Name of the program
Brief description of each tool

LALIGN

  •  Be able to compare two protein sequences or DNA sequences.
  •  Will show the percentage of identity between two sequences.
  • Be able to compare two protein or DNA sequences.
  • Also show the percentage of identity between two sequences.
  • Be able to compare two protein or DNA sequences. Also, some advanced function like comparing DNA to protein sequences.
  • With graphics to show the identity and alignment between sequences.

Note: For PC users only.

Brief instructions to get started using these programs.